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    cdaR DNA-binding transcriptional activator CdaR [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 944860, updated on 3-Dec-2024

    Summary

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    Official Symbol
    cdaR
    Official Full Name
    DNA-binding transcriptional activator CdaR
    Primary source
    ECOCYC:EG12335
    Locus tag
    b0162
    See related
    ASAP:ABE-0000554
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0161; sdaR; yaeG
    Summary
    The "Carbohydrate diacid regulator," CdaR, or "sugar diacid regulator," SdaR, regulates genes involved in the uptake and metabolism of galactarate and glucarate, and it is also autoregulated . [More information is available at EcoCyc: EG12335].
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    Genomic context

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    Sequence:
    NC_000913.3 (182463..183620)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene dGTP triphosphohydrolase Neighboring gene periplasmic serine endoprotease DegP Neighboring gene DUF3461 domain-containing protein YaeH Neighboring gene phosphodiesterase YaeI

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phosphotransferase-mediated transport of the osmolyte 2-O-alpha-mannosyl-D-glycerate in Escherichia coli occurs by the product of the mngA (hrsA) gene and is regulated by the mngR (farR) gene product acting as repressor. Sampaio MM, et al. J Biol Chem, 2004 Feb 13. PMID 14645248
    2. Systematic sequencing of the Escherichia coli genome: analysis of the 2.4-4.1 min (110,917-193,643 bp) region. Fujita N, et al. Nucleic Acids Res, 1994 May 11. PMID 8202364, Free PMC Article
    3. A common regulator for the operons encoding the enzymes involved in D-galactarate, D-glucarate, and D-glycerate utilization in Escherichia coli. Monterrubio R, et al. J Bacteriol, 2000 May. PMID 10762278, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of DNA-templated transcription IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA-binding transcriptional activator CdaR

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      182463..183620
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414704.4 DNA-binding transcriptional activator CdaR [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414704.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7RE08, A0AAE9TLC4
      Conserved Domains (1) summary
      PRK11477
      Location:1 → 385
      PRK11477; CdaR family transcriptional regulator
    Nucleotide Protein
    Heading Accession and Version

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