U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ybaL putative transporter YbaL [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946576, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ybaL
    Official Full Name
    putative transporter YbaL
    Primary source
    ECOCYC:EG12623
    Locus tag
    b0478
    See related
    ASAP:ABE-0001658
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0472; ylaA
    Summary
    The YbaL protein is an uncharacterised member of the CPA-2 family of monovalent/proton antiporters. [More information is available at EcoCyc: EG12623].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (501562..503238, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene ferrochelatase Neighboring gene acetylesterase Neighboring gene inosine/guanosine kinase Neighboring gene fosmidomycin efflux pump Neighboring gene 5'-nucleotidase/UDP-sugar hydrolase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A microarray-based antibiotic screen identifies a regulatory role for supercoiling in the osmotic stress response of Escherichia coli. Cheung KJ, et al. Genome Res, 2003 Feb. PMID 12566398, Free PMC Article
    2. Cloning and characterization of the gsk gene encoding guanosine kinase of Escherichia coli. Harlow KW, et al. J Bacteriol, 1995 Apr. PMID 7721718, Free PMC Article
    3. Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS. Zhang N, et al. Proteomics, 2007 Feb. PMID 17309111
    4. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
    5. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables monoatomic cation transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in monoatomic ion transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in potassium ion transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in proton transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    putative transporter YbaL

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      501562..503238 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415011.1 putative transporter YbaL [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415011.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6N0IHD3
      Conserved Domains (1) summary
      PRK10669
      Location:1 → 558
      PRK10669; putative cation:proton antiport protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.