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    rpnE inactive recombination-promoting nuclease-like protein RpnE [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946737, updated on 3-Dec-2024

    Summary

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    Official Symbol
    rpnE
    Official Full Name
    inactive recombination-promoting nuclease-like protein RpnE
    Primary source
    ECOCYC:EG12323
    Locus tag
    b2244
    See related
    ASAP:ABE-0007429
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2236; yfaD
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    Genomic context

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    Sequence:
    NC_000913.3 (2356904..2357803)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene anaerobic glycerol-3-phosphate dehydrogenase subunit A Neighboring gene anaerobic glycerol-3-phosphate dehydrogenase subunit B Neighboring gene anaerobic glycerol-3-phosphate dehydrogenase subunit C Neighboring gene pseudo Neighboring gene 2-keto-3-deoxy-L-rhamnonate aldolase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Intrinsic and extrinsic approaches for detecting genes in a bacterial genome. Borodovsky M, et al. Nucleic Acids Res, 1994 Nov 11. PMID 7984428, Free PMC Article
    2. Nucleotide sequence and gene-polypeptide relationships of the glpABC operon encoding the anaerobic sn-glycerol-3-phosphate dehydrogenase of Escherichia coli K-12. Cole ST, et al. J Bacteriol, 1988 Jun. PMID 3286606, Free PMC Article
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    inactive recombination-promoting nuclease-like protein RpnE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2356904..2357803
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416747.1 inactive recombination-promoting nuclease-like protein RpnE [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416747.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8T3UMG6
      Conserved Domains (1) summary
      PRK09956
      Location:1 → 299
      PRK09956; ISNCY family transposase
    Nucleotide Protein
    Heading Accession and Version

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