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    htrL protein HtrL [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948137, updated on 3-Dec-2024

    Summary

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    Official Symbol
    htrL
    Official Full Name
    protein HtrL
    Primary source
    ECOCYC:EG11188
    Locus tag
    b3618
    See related
    ASAP:ABE-0011838
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3608; yibB
    Summary
    yibB was named htrL in a 1996 DNA sequence submission (M94888} but no data has been published so the htrL gene name and functional information is retracted from EcoGene; it is retained as a synonym. [More information is available at EcoGene: EG11188]. The function of htrL is currently unknown, though it has been shown to be transcribed in both exponential and stationary phases . [More information is available at EcoCyc: EG11188].
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    Genomic context

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    Sequence:
    NC_000913.3 (3792826..3793683, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene threonine dehydrogenase Neighboring gene 2-amino-3-ketobutyrate CoA ligase Neighboring gene ADP-L-glycero-D-mannoheptose 6-epimerase Neighboring gene ADP-heptose--LPS heptosyltransferase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Reverse transcriptase-polymerase chain reaction validation of 25 "orphan" genes from Escherichia coli K-12 MG1655. Alimi JP, et al. Genome Res, 2000 Jul. PMID 10899145, Free PMC Article
    2. Nucleotide sequence of the 2-amino-3-ketobutyrate coenzyme A ligase (kbl) gene of E. coli. Aronson BD, et al. Nucleic Acids Res, 1988 Apr 25. PMID 3287333, Free PMC Article
    3. Cloning, expression, and characterization of the Escherichia coli K-12 rfaD gene. Pegues JC, et al. J Bacteriol, 1990 Aug. PMID 2198271, Free PMC Article
    4. Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes. Sofia HJ, et al. Nucleic Acids Res, 1994 Jul 11. PMID 8041620, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    protein HtrL

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3792826..3793683 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418075.2 protein HtrL [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418075.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A3P1YEM8, A0A8T6BFM2
      Conserved Domains (1) summary
      PRK11346
      Location:1 → 285
      PRK11346; hypothetical protein; Provisional
    Nucleotide Protein
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