U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ybhG HlyD_D23 family protein YbhG [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945414, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ybhG
    Official Full Name
    HlyD_D23 family protein YbhG
    Primary source
    ECOCYC:G6412
    Locus tag
    b0795
    See related
    ASAP:ABE-0002709
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0784
    Summary
    The putative ybiHybhGFSR operon encodes the YbhG putative membrane fusion protein of efflux pumps. [More information is available at EcoGene: EG13315].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (828974..829972, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene inner membrane protein YbhQ Neighboring gene ABC exporter membrane subunit YbhR Neighboring gene ABC exporter membrane subunit YbhS Neighboring gene ABC exporter ATP binding subunit YbhF Neighboring gene DNA-binding transcriptional dual regulator CecR Neighboring gene ATP-dependent RNA helicase RhlE

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The Escherichia coli ATP-binding cassette (ABC) proteins. Linton KJ, et al. Mol Microbiol, 1998 Apr. PMID 9593292
    2. Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS. Zhang N, et al. Proteomics, 2007 Feb. PMID 17309111
    3. Transcription factor CecR (YbiH) regulates a set of genes affecting the sensitivity of Escherichia coli against cefoperazone and chloramphenicol. Yamanaka Y, et al. Microbiology (Reading), 2016 Jul. PMID 27112147
    4. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within response to antibiotic IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in periplasmic space IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    HlyD_D23 family protein YbhG

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      828974..829972 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415316.1 HlyD_D23 family protein YbhG [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415316.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q8FJN6
      UniProtKB/TrEMBL
      A0A854BEK7
      Conserved Domains (1) summary
      PRK03598
      Location:2 → 332
      PRK03598; putative efflux pump membrane fusion protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.