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    yjcO Sel1 repeat-containing protein YjcO [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948586, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yjcO
    Official Full Name
    Sel1 repeat-containing protein YjcO
    Primary source
    ECOCYC:EG11951
    Locus tag
    b4078
    See related
    ASAP:ABE-0013360
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4071
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    Genomic context

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    Sequence:
    NC_000913.3 (4296436..4297125, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative formate-dependent nitrite reductase complex subunit NrfF Neighboring gene putative formate-dependent nitrite reductase complex subunit NrfG Neighboring gene glutamate/aspartate : H(+) symporter GltP Neighboring gene formate dehydrogenase H Neighboring gene putative multidrug efflux pump outer membrane channel Neighboring gene putative multidrug efflux pump subunit MdtO

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the Escherichia coli genome. IV. DNA sequence of the region from 89.2 to 92.8 minutes. Blattner FR, et al. Nucleic Acids Res, 1993 Nov 25. PMID 8265357, Free PMC Article
    2. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    Sel1 repeat-containing protein YjcO

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4296436..4297125 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418502.1 Sel1 repeat-containing protein YjcO [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418502.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2X1MNI1, A0A376X6M3
      Conserved Domains (2) summary
      COG0790
      Location:4 → 229
      TPR; TPR repeat [Signal transduction mechanisms]
      sd00010
      Location:50 → 79
      SLR; SLR repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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