U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    yjdN PF06983 family protein YjdN [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948622, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    yjdN
    Official Full Name
    PF06983 family protein YjdN
    Primary source
    ECOCYC:EG10712
    Locus tag
    b4107
    See related
    ASAP:ABE-0013447
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4100; phnB
    Summary
    The phn genes of Escherichia coli B have been cloned . [More information is available at EcoCyc: EG10712].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (4325298..4325741, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene phosphonate/phosphate ABC transporter periplasmic binding protein Neighboring gene phosphonate/phosphate ABC transporter ATP binding subunit Neighboring gene zinc ribbon domain-containing protein YjdM Neighboring gene regulator of diguanylate cyclase RdcA Neighboring gene regulator of diguanylate cyclase RdcB

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Rifampicin resistance of Mu lysogenic strains by rpoB mutations. Kirschbaum TM, et al. Biol Chem Hoppe Seyler, 1993 Aug. PMID 8240720
    2. Mapping and molecular cloning of the phn (psiD) locus for phosphonate utilization in Escherichia coli. Wanner BL, et al. J Bacteriol, 1990 Mar. PMID 2155195, Free PMC Article
    3. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
    4. Evidence for a fourteen-gene, phnC to phnP locus for phosphonate metabolism in Escherichia coli. Metcalf WW, et al. Gene, 1993 Jul 15. PMID 8335257
    5. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General protein information

    Go to the top of the page Help
    Preferred Names
    PF06983 family protein YjdN

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4325298..4325741 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418531.1 PF06983 family protein YjdN [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418531.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376MDW6
      Conserved Domains (1) summary
      PRK10148
      Location:1 → 147
      PRK10148; VOC family metalloprotein YjdN
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.