U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    yabI DedA family protein YabI [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 944783, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    yabI
    Official Full Name
    DedA family protein YabI
    Primary source
    ECOCYC:EG11571
    Locus tag
    b0065
    See related
    ASAP:ABE-0000241
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0066
    Summary
    YabI is a member of the DedA family of inner membrane proteins . [More information is available at EcoCyc: EG11571].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (71351..72115)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene ribulokinase Neighboring gene DNA-binding transcriptional dual regulator AraC Neighboring gene thiamine ABC transporter ATP binding subunit Neighboring gene thiamine ABC transporter membrane subunit Neighboring gene thiamine ABC transporter periplasmic binding protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Metabolic context and possible physiological themes of sigma(54)-dependent genes in Escherichia coli. Reitzer L, et al. Microbiol Mol Biol Rev, 2001 Sep. PMID 11528004, Free PMC Article
    2. Escherichia coli genes and pathways involved in surviving extreme exposure to ionizing radiation. Byrne RT, et al. J Bacteriol, 2014 Oct. PMID 25049088, Free PMC Article
    3. Multiple pathways for regulation of sigmaS (RpoS) stability in Escherichia coli via the action of multiple anti-adaptors. Bougdour A, et al. Mol Microbiol, 2008 Apr. PMID 18383615
    4. DNA microarray-based identification of genes controlled by autoinducer 2-stimulated quorum sensing in Escherichia coli. DeLisa MP, et al. J Bacteriol, 2001 Sep. PMID 11514505, Free PMC Article
    5. Systematic sequencing of the Escherichia coli genome: analysis of the 0-2.4 min region. Yura T, et al. Nucleic Acids Res, 1992 Jul 11. PMID 1630901, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within FtsZ-dependent cytokinesis IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within response to ionizing radiation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    DedA family protein YabI

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      71351..72115
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414607.1 DedA family protein YabI [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414607.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S0G205
      Conserved Domains (1) summary
      COG0586
      Location:8 → 206
      DedA; Uncharacterized membrane protein DedA, SNARE-associated domain [Function unknown]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.