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    yadK putative fimbrial protein YadK [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 944835, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yadK
    Official Full Name
    putative fimbrial protein YadK
    Primary source
    ECOCYC:EG12325
    Locus tag
    b0136
    See related
    ASAP:ABE-0000472
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0135
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    Genomic context

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    Sequence:
    NC_000913.3 (151003..151599, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene 3-methyl-2-oxobutanoate hydroxymethyltransferase Neighboring gene fimbrial tip-adhesin YadC Neighboring gene putative fimbrial protein YadL Neighboring gene putative fimbrial protein YadM

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Identification of a novel adhesin involved in acid-induced adhesion of enterohaemorrhagic Escherichia coli O157 : H7. Chingcuanco F, et al. Microbiology (Reading), 2012 Sep. PMID 22767547
    2. Functional analysis of Escherichia coli Yad fimbriae reveals their potential role in environmental persistence. Larsonneur F, et al. Environ Microbiol, 2016 Dec. PMID 27696649
    3. Escherichia coli K-12 possesses multiple cryptic but functional chaperone-usher fimbriae with distinct surface specificities. Korea CG, et al. Environ Microbiol, 2010 Jul. PMID 20345943
    4. Systematic sequencing of the Escherichia coli genome: analysis of the 2.4-4.1 min (110,917-193,643 bp) region. Fujita N, et al. Nucleic Acids Res, 1994 May 11. PMID 8202364, Free PMC Article
    5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. These results provide persuasive evidence that YadK plays a significant role in the adhesion of acid-stressed enterohaemorrhagic Escherichia coli to epithelial cells.
      Title: Identification of a novel adhesin involved in acid-induced adhesion of enterohaemorrhagic Escherichia coli O157 : H7.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    involved_in cell adhesion IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within cell adhesion IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in cell adhesion involved in single-species biofilm formation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    acts_upstream_of_or_within cell adhesion involved in single-species biofilm formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in pilus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in pilus IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in pilus IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative fimbrial protein YadK

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      151003..151599 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414678.1 putative fimbrial protein YadK [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414678.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8T6A9D9
      Conserved Domains (1) summary
      PRK15262
      Location:4 → 198
      PRK15262; putative fimbrial protein StaF; Provisional
    Nucleotide Protein
    Heading Accession and Version

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