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    ybbW putative allantoin transporter [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945138, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ybbW
    Official Full Name
    putative allantoin transporter
    Primary source
    ECOCYC:G6280
    Locus tag
    b0511
    See related
    ASAP:ABE-0001764
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    allP; ECK0504; glxB2
    Summary
    The YbbW protein is an uncharacterized member of the NCS1 family of purine and pyrimidine transporters . [More information is available at EcoCyc: G6280].
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    Genomic context

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    Sequence:
    NC_000913.3 (537633..539087)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene hydroxypyruvate isomerase Neighboring gene tartronate semialdehyde reductase 2 Neighboring gene allantoinase Neighboring gene putative purine transporter

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic characterization of novel transport protein families revealed by genome analyses. Saier MH Jr, et al. Biochim Biophys Acta, 1999 Feb 25. PMID 10082980
    2. E. coli allantoinase is activated by the downstream metabolic enzyme, glycerate kinase, and stabilizes the putative allantoin transporter by direct binding. Rodionova IA, et al. Sci Rep, 2023 May 5. PMID 37147430, Free PMC Article
    3. Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli. Cusa E, et al. J Bacteriol, 1999 Dec. PMID 10601204, Free PMC Article
    4. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
    5. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables nucleobase transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in allantoin transport IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in nucleobase transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in purine nucleobase metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative allantoin transporter

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      537633..539087
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415044.4 putative allantoin transporter [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415044.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A827XRZ1
      Conserved Domains (1) summary
      PRK11375
      Location:1 → 484
      PRK11375; putative allantoin permease
    Nucleotide Protein
    Heading Accession and Version

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