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    ybbY putative purine transporter [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945131, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ybbY
    Official Full Name
    putative purine transporter
    Primary source
    ECOCYC:G6282
    Locus tag
    b0513
    See related
    ASAP:ABE-0001771
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0506; glxB4
    Summary
    YbbY is an inner membrane protein with 11 predicted transmembrane domains. [More information is available at EcoCyc: G6282].
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    Genomic context

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    Sequence:
    NC_000913.3 (540565..541866)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative allantoin transporter Neighboring gene allantoinase Neighboring gene glycerate 2-kinase 2 Neighboring gene (S)-ureidoglycine aminohydrolase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic analysis of a chromosomal region containing genes required for assimilation of allantoin nitrogen and linked glyoxylate metabolism in Escherichia coli. Cusa E, et al. J Bacteriol, 1999 Dec. PMID 10601204, Free PMC Article
    2. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
    3. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables nucleobase transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables xanthine transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in xanthine transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative purine transporter

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      540565..541866
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415046.4 putative purine transporter [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415046.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1V2GCU5, A0A6C9JSL6
      Conserved Domains (1) summary
      PRK11412
      Location:1 → 433
      PRK11412; uracil/xanthine transporter
    Nucleotide Protein
    Heading Accession and Version

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