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    ymfK putative repressor protein YmfK [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945719, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ymfK
    Official Full Name
    putative repressor protein YmfK
    Primary source
    ECOCYC:G6589
    Locus tag
    b1145
    See related
    ASAP:ABE-0003851
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    cohE; ECK1131
    Summary
    CohE(YmfK) is a V4I variant of a putative CI-like repressor protein from Shigella flexneri bacteriophage V. [More information is available at EcoGene: EG14249].
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    Genomic context

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    Sequence:
    NC_000913.3 (1202259..1202933, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative protein YmfH Neighboring gene uncharacterized protein YmfI Neighboring gene uncharacterized protein YmfJ Neighboring gene putative DNA-binding transcriptional regulator YmfT Neighboring gene uncharacterized protein YmfL Neighboring gene cell division inhibitor YmfM

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the lambdoid prophage element e14 in the E. coli K-12 genome. Mehta P, et al. BMC Microbiol, 2004 Jan 20. PMID 14733619, Free PMC Article
    2. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    3. MEROPS: the peptidase database. Rawlings ND, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381862, Free PMC Article
    4. Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Baba T, et al. Mol Syst Biol, 2006. PMID 16738554, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    putative repressor protein YmfK

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1202259..1202933 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415663.1 putative repressor protein YmfK [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415663.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A7D7KH05
      Conserved Domains (1) summary
      COG1974
      Location:8 → 219
      LexA; SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase) [Transcription, Signal transduction mechanisms]
    Nucleotide Protein
    Heading Accession and Version

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