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    ydeA L-arabinose exporter [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947218, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ydeA
    Official Full Name
    L-arabinose exporter
    Primary source
    ECOCYC:EG11636
    Locus tag
    b1528
    See related
    ASAP:ABE-0005103
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1521
    Summary
    Major Facilitator Superfamily (MFS). [More information is available at EcoGene: EG11636]. YdeA is a member of the major facilitator superfamily (MFS) of transporters . [More information is available at EcoCyc: EG11636].
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    Genomic context

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    Sequence:
    NC_000913.3 (1617028..1618218)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative DNA-binding transcriptional regulator YneJ Neighboring gene protein YneK Neighboring gene inner membrane protein MarC Neighboring gene DNA-binding transcriptional repressor MarR

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Escherichia coli gene ydeA encodes a major facilitator pump which exports L-arabinose and isopropyl-beta-D-thiogalactopyranoside. Carolé S, et al. J Bacteriol, 1999 Aug. PMID 10438792, Free PMC Article
    2. Transcriptional activation of ydeA, which encodes a member of the major facilitator superfamily, interferes with arabinose accumulation and induction of the Escherichia coli arabinose PBAD promoter. Bost S, et al. J Bacteriol, 1999 Apr. PMID 10094697, Free PMC Article
    3. Genetic and functional analysis of the multiple antibiotic resistance (mar) locus in Escherichia coli. Cohen SP, et al. J Bacteriol, 1993 Mar. PMID 8383113, Free PMC Article
    4. Analysis of a complete library of putative drug transporter genes in Escherichia coli. Nishino K, et al. J Bacteriol, 2001 Oct. PMID 11566977, Free PMC Article
    5. Microbial drug efflux proteins of the major facilitator superfamily. Saidijam M, et al. Curr Drug Targets, 2006 Jul. PMID 16842212

    See all (15) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    L-arabinose exporter

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1617028..1618218
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416045.1 L-arabinose exporter [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416045.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376S6E6
      Conserved Domains (1) summary
      PRK03545
      Location:5 → 394
      PRK03545; putative arabinose transporter; Provisional
    Nucleotide Protein
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