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    ydfT putative antitermination protein Q [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946103, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ydfT
    Official Full Name
    putative antitermination protein Q
    Primary source
    ECOCYC:G6830
    Locus tag
    b1559
    See related
    ASAP:ABE-0005207
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1553; quuQ
    Summary
    QuuQ contains an insertion of 47 aa that splits the phage antiterminator Q protein family 2 domain (pfam03589) after residue 109. [More information is available at EcoGene: EG13832].
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    Genomic context

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    Sequence:
    NC_000913.3 (1642489..1643241, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene cold shock-like protein CspF Neighboring gene protein YnfS Neighboring gene protein YdfU Neighboring gene protein Rem

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Origin of cryptic lambda prophages in Escherichia coli K-12. Redfield RJ, et al. Cold Spring Harb Symp Quant Biol, 1984. PMID 6099234
    2. Integration of bacteriophage lambda into the cryptic lambdoid prophages of Escherichia coli. Lichens-Park A, et al. J Bacteriol, 1990 May. PMID 2139644, Free PMC Article
    3. The origin of Q-independent derivatives of phage lambda. Kaiser K. Mol Gen Genet, 1980. PMID 6255285
    4. Defective prophage in Escherichia coli K12 strains. Strathern A, et al. Virology, 1975 Sep. PMID 1101520
    5. Bacteriophage 82 gene Q and Q protein. Sequence, overproduction, and activity as a transcription antiterminator in vitro. Goliger JA, et al. J Biol Chem, 1987 Aug 25. PMID 3624233

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    putative antitermination protein Q

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1642489..1643241 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416077.4 putative antitermination protein Q [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416077.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5C9ANE0
      Conserved Domains (2) summary
      COG0484
      Location:113 → 174
      DnaJ; DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
      pfam03589
      Location:26 → 107
      Antiterm; Antitermination protein
    Nucleotide Protein
    Heading Accession and Version

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