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    ynfF putative selenate reductase YnfF [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945268, updated on 17-Dec-2024

    Summary

    Official Symbol
    ynfF
    Official Full Name
    putative selenate reductase YnfF
    Primary source
    ECOCYC:G6846
    Locus tag
    b1588
    See related
    ASAP:ABE-0005307
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1583
    Summary
    Verified Tat substrate: [More information is available at EcoGene: EG13844]. YnfF is highly similar to DmsA, the catalytic subunit of the dimethyl sulfoxide reductase heterotrimer, and cross-reacts with an anti-DmsA antibody. [More information is available at EcoCyc: G6846].
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    Genomic context

    Sequence:
    NC_000913.3 (1660556..1662979)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF1161 domain-containing protein YnfD Neighboring gene putative selenate reductase YnfE Neighboring gene putative oxidoreductase YnfG Neighboring gene putative menaquinol dehydrogenase

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables 4 iron, 4 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables dimethyl sulfoxide reductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables electron transfer activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables molybdenum ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables molybdenum ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables molybdopterin cofactor binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    enables selenate reductase activity IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in anaerobic respiration IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    involved_in anaerobic respiration NAS
    Non-traceable Author Statement
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in outer membrane-bounded periplasmic space IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of oxidoreductase complex NAS
    Non-traceable Author Statement
    more info
    PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    putative selenate reductase YnfF
    NP_416105.4

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1660556..1662979
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416105.4 putative selenate reductase YnfF [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416105.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5C9ARG2, A0A6N8QT60, A0A7T2J4N6, A0A8E0FQI4, Q6EWW7
      Conserved Domains (1) summary
      TIGR02166
      Location:14807
      dmsA_ynfE; anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family