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    rsxD SoxR [2Fe-2S] reducing system protein RsxD [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946134, updated on 3-Dec-2024

    Summary

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    Official Symbol
    rsxD
    Official Full Name
    SoxR [2Fe-2S] reducing system protein RsxD
    Primary source
    ECOCYC:G6874
    Locus tag
    b1630
    See related
    ASAP:ABE-0005457
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1626; ydgO
    Summary
    RsxD is predicted to span the membrane greater than six times . [More information is available at EcoCyc: G6874].
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    Genomic context

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    Sequence:
    NC_000913.3 (1709142..1710200)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene SoxR [2Fe-2S] reducing system protein RsxA Neighboring gene SoxR [2Fe-2S] reducing system protein RsxB Neighboring gene SoxR [2Fe-2S] reducing system protein RsxC Neighboring gene SoxR [2Fe-2S] reducing system protein RsxG Neighboring gene SoxR [2Fe-2S] reducing system protein RsxE Neighboring gene endonuclease III

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Covalent binding of flavins to RnfG and RnfD in the Rnf complex from Vibrio cholerae. Backiel J, et al. Biochemistry, 2008 Oct 28. PMID 18831535, Free PMC Article
    2. FMN is covalently attached to a threonine residue in the NqrB and NqrC subunits of Na(+)-translocating NADH-quinone reductase from Vibrio alginolyticus. Hayashi M, et al. FEBS Lett, 2001 Jan 12. PMID 11163785
    3. Characterization of components of a reducing system for SoxR in the cytoplasmic membrane of Escherichia coli. Lee KL, et al. J Microbiol, 2022 Apr. PMID 35344189
    4. Covalent attachment of flavin adenine dinucleotide (FAD) and flavin mononucleotide (FMN) to enzymes: the current state of affairs. Mewies M, et al. Protein Sci, 1998 Jan. PMID 9514256, Free PMC Article
    5. The genes encoding endonuclease VIII and endonuclease III in Escherichia coli are transcribed as the terminal genes in operons. Gifford CM, et al. Nucleic Acids Res, 2000 Feb 1. PMID 10637328, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables oxidoreductase activity, acting on NAD(P)H IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in electron transport chain IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of oxidoreductase complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of plasma membrane protein complex IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SoxR [2Fe-2S] reducing system protein RsxD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1709142..1710200
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416147.1 SoxR [2Fe-2S] reducing system protein RsxD [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416147.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376WY52
      Conserved Domains (1) summary
      PRK00816
      Location:2 → 351
      rnfD; electron transport complex protein RnfD; Reviewed
    Nucleotide Protein
    Heading Accession and Version

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