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    yoaI protein YoaI [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946294, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yoaI
    Official Full Name
    protein YoaI
    Primary source
    ECOCYC:G6974
    Locus tag
    b1788
    See related
    ASAP:ABE-0005947
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1786
    Summary
    Immunoblots of chromosomal SPA-tagged YoaI failed to show a band, indicating that if yoaI is a gene, it is not expressed under the conditions tested (Hemm, 2008). [More information is available at EcoGene: EG14417].
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    Genomic context

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    Sequence:
    NC_000913.3 (1874078..1874182, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene diguanylate cyclase DgcJ Neighboring gene mischarged aminoacyl-tRNA deacylase Neighboring gene DUF441 domain-containing inner membrane protein YeaL Neighboring gene DNA-binding transcriptional repressor NimR Neighboring gene 2-nitroimidazole exporter

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
    2. Small membrane proteins found by comparative genomics and ribosome binding site models. Hemm MR, et al. Mol Microbiol, 2008 Dec. PMID 19121005, Free PMC Article
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein YoaI

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1874078..1874182 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416302.2 protein YoaI [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416302.2

      Status: PROVISIONAL

    Nucleotide Protein
    Heading Accession and Version

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