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    elaD protease ElaD [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946742, updated on 3-Dec-2024

    Summary

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    Official Symbol
    elaD
    Official Full Name
    protease ElaD
    Primary source
    ECOCYC:G7176
    Locus tag
    b2269
    See related
    ASAP:ABE-0007499
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2263
    Summary
    The elaABCD genes are named, without a phenotypic explanation, in Genbank U58768. [More information is available at EcoGene: EG14261]. ElaD is a deubiquitinating protease. [More information is available at EcoCyc: G7176].
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    Genomic context

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    Sequence:
    NC_000913.3 (2382713..2383924)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative acetyltransferase ElaA Neighboring gene ribonuclease BN Neighboring gene IPR002035/DUF3520 domain-containing protein YfbK Neighboring gene putative peptidase YfbL

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. ElaD, a Deubiquitinating protease expressed by E. coli. Catic A, et al. PLoS One, 2007 Apr 18. PMID 17440617, Free PMC Article
    2. MEROPS: the peptidase database. Rawlings ND, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381862, Free PMC Article
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables cysteine-type peptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables cysteine-type peptidase activity IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    enables deSUMOylase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein desumoylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    acts_upstream_of_or_within protein deubiquitination IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    protease ElaD
    NP_416772.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2382713..2383924
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416772.1 protease ElaD [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416772.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0A6T011, A0A140N5Y4
      Conserved Domains (1) summary
      PRK11836
      Location:1 → 403
      PRK11836; deubiquitinase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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