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    yphC putative zinc-binding dehydrogenase YphC [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947019, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yphC
    Official Full Name
    putative zinc-binding dehydrogenase YphC
    Primary source
    ECOCYC:G7339
    Locus tag
    b2545
    See related
    ASAP:ABE-0008370
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2542
    Summary
    Predicted yphFEDCB operon. [More information is available at EcoGene: EG13464].
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    Genomic context

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    Sequence:
    NC_000913.3 (2674700..2675761, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative inner membrane protein Neighboring gene putative aldose 1-epimerase YphB Neighboring gene putative ABC transporter membrane subunit YphD Neighboring gene putative ABC transporter ATP-binding protein YphE

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    2. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    3. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative zinc-binding dehydrogenase YphC

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2674700..2675761 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417040.2 putative zinc-binding dehydrogenase YphC [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417040.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A0H3MN75, A0A1M0CXE1, A0A330BUJ2, A0A376HMA9, A0A376WVV3, A0A6D0HAL6, A0A7A6A8N5, A0AAE9PRT4, A0AAN3PY30, B7UGY5, S1PTL8
      Conserved Domains (1) summary
      cd08239
      Location:4 → 351
      THR_DH_like; L-threonine dehydrogenase (TDH)-like
    Nucleotide Protein
    Heading Accession and Version

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