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    yqgA DUF554 domain-containing protein YqgA [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947462, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yqgA
    Official Full Name
    DUF554 domain-containing protein YqgA
    Primary source
    ECOCYC:G7534
    Locus tag
    b2966
    See related
    ASAP:ABE-0009736
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2961
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    Genomic context

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    Sequence:
    NC_000913.3 (3109553..3110260)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene constitutive ornithine decarboxylase Neighboring gene protein YqgH Neighboring gene tRNA-Phe Neighboring gene putative type II secretion system M-type protein YghD

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global analysis of candidate genes important for fitness in a competitive biofilm using DNA-array-based transposon mapping. Junker LM, et al. Microbiology (Reading), 2006 Aug. PMID 16849790
    2. Global gene expression profiling of asymptomatic bacteriuria Escherichia coli during biofilm growth in human urine. Hancock V, et al. Infect Immun, 2007 Feb. PMID 17145952, Free PMC Article
    3. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    DUF554 domain-containing protein YqgA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3109553..3110260
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417441.1 DUF554 domain-containing protein YqgA [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417441.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7IMF8
      Conserved Domains (1) summary
      COG1811
      Location:1 → 235
      YqgA; Uncharacterized membrane protein YqgA, affects biofilm formation [Function unknown]
    Nucleotide Protein
    Heading Accession and Version

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