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    garR tartronate semialdehyde reductase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947631, updated on 3-Dec-2024

    Summary

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    Official Symbol
    garR
    Official Full Name
    tartronate semialdehyde reductase
    Primary source
    ECOCYC:EG11176
    Locus tag
    b3125
    See related
    ASAP:ABE-0010273
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3113; yhaE
    Summary
    Tartronate semialdehyde reductase (GarR) catalyzes the reduction of tatronate semialdehyde to yield glycerate . [More information is available at EcoCyc: EG11176].
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    Genomic context

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    Sequence:
    NC_000913.3 (3271867..3272751, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene glycerate 2-kinase 1 Neighboring gene alpha-dehydro-beta-deoxy-D-glucarate aldolase Neighboring gene galactarate/D-glucarate transporter GarP

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Precise mapping of the rnpB gene encoding the RNA component of RNase P in Escherichia coli K-12. Komine Y, et al. J Bacteriol, 1991 Mar. PMID 1705543, Free PMC Article
    2. Processing of the precursor to the catalytic RNA subunit of RNase P from Escherichia coli. Lundberg U, et al. RNA, 1995 May. PMID 7489504, Free PMC Article
    3. Proteome analysis of Escherichia coli using high-performance liquid chromatography and Fourier transform ion cyclotron resonance mass spectrometry. Ihling C, et al. Proteomics, 2005 May. PMID 15852340
    4. A common regulator for the operons encoding the enzymes involved in D-galactarate, D-glucarate, and D-glycerate utilization in Escherichia coli. Monterrubio R, et al. J Bacteriol, 2000 May. PMID 10762278, Free PMC Article
    5. Evolution of enzymatic activities in the enolase superfamily: characterization of the (D)-glucarate/galactarate catabolic pathway in Escherichia coli. Hubbard BK, et al. Biochemistry, 1998 Oct 13. PMID 9772162

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables 2-hydroxy-3-oxopropionate reductase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables 2-hydroxy-3-oxopropionate reductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables NAD binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables NADP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within D-glucarate catabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within galactarate catabolic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in galactarate catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in glyoxylate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in organic acid catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    tartronate semialdehyde reductase
    NP_417594.3

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3271867..3272751 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417594.3 tartronate semialdehyde reductase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417594.3

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A828TWK8
      Conserved Domains (1) summary
      PRK11559
      Location:1 → 294
      garR; tartronate semialdehyde reductase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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