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    garP galactarate/D-glucarate transporter GarP [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947642, updated on 3-Dec-2024

    Summary

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    Official Symbol
    garP
    Official Full Name
    galactarate/D-glucarate transporter GarP
    Primary source
    ECOCYC:EG12760
    Locus tag
    b3127
    See related
    ASAP:ABE-0010279
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3115; yhaU
    Summary
    Major Facilitator Superfamily (MFS). [More information is available at EcoGene: EG12760]. YhaU is an uncharacterised member of the major facilitator superfamily (MFS) of transporters . [More information is available at EcoCyc: EG12760].
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    Genomic context

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    Sequence:
    NC_000913.3 (3273573..3274907, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene tartronate semialdehyde reductase Neighboring gene alpha-dehydro-beta-deoxy-D-glucarate aldolase Neighboring gene GarD Neighboring gene antitoxin PrlF Neighboring gene ribosome-dependent mRNA interferase toxin YhaV

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Processing of the precursor to the catalytic RNA subunit of RNase P from Escherichia coli. Lundberg U, et al. RNA, 1995 May. PMID 7489504, Free PMC Article
    2. Identifying Escherichia coli genes involved in intrinsic multidrug resistance. Duo M, et al. Appl Microbiol Biotechnol, 2008 Dec. PMID 18807027
    3. Microbial drug efflux proteins of the major facilitator superfamily. Saidijam M, et al. Curr Drug Targets, 2006 Jul. PMID 16842212
    4. The major facilitator superfamily. Saier MH Jr, et al. J Mol Microbiol Biotechnol, 1999 Nov. PMID 10943556
    5. A major superfamily of transmembrane facilitators that catalyse uniport, symport and antiport. Marger MD, et al. Trends Biochem Sci, 1993 Jan. PMID 8438231

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables monoatomic anion:monoatomic cation symporter activity RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within D-glucarate metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within D-glucarate metabolic process RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    acts_upstream_of_or_within galactarate metabolic process IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within galactarate metabolic process RCA
    inferred from Reviewed Computational Analysis
    more info
    		 PubMed 
    involved_in monoatomic anion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    galactarate/D-glucarate transporter GarP

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3273573..3274907 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417596.1 galactarate/D-glucarate transporter GarP [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417596.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A2H4TUM7
      Conserved Domains (1) summary
      TIGR00893
      Location:25 → 434
      2A0114; D-galactonate transporter
    Nucleotide Protein
    Heading Accession and Version

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