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    rpmJ 50S ribosomal subunit protein L36 [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947805, updated on 3-Dec-2024

    Summary

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    Official Symbol
    rpmJ
    Official Full Name
    50S ribosomal subunit protein L36
    Primary source
    ECOCYC:EG11232
    Locus tag
    b3299
    See related
    ASAP:ABE-0010812
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3286; secX
    Summary
    Non-essential gene; mutant cells grow slowly. [More information is available at EcoGene: EG11232]. The L36 protein is a component of the 50S subunit of the ribosome . [More information is available at EcoCyc: EG11232].
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    Genomic context

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    Sequence:
    NC_000913.3 (3442618..3442734, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene 30S ribosomal subunit protein S11 Neighboring gene 30S ribosomal subunit protein S13 Neighboring gene Sec translocon subunit SecY Neighboring gene 50S ribosomal subunit protein L15

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A small protein unique to bacteria organizes rRNA tertiary structure over an extensive region of the 50 S ribosomal subunit. Maeder C, et al. J Mol Biol, 2005 Nov 25. PMID 16246363
    2. Single methylation of 23S rRNA triggers late steps of 50S ribosomal subunit assembly. Arai T, et al. Proc Natl Acad Sci U S A, 2015 Aug 25. PMID 26261349, Free PMC Article
    3. Disruption of rpmJ encoding ribosomal protein L36 decreases the expression of secY upstream of the spc operon and inhibits protein translocation in Escherichia coli. Ikegami A, et al. Biosci Biotechnol Biochem, 2005 Aug. PMID 16116291
    4. Nonspecific inhibition of Escherichia coli ornithine decarboxylase by various ribosomal proteins: detection of a new ribosomal protein possessing strong antizyme activity. Kashiwagi K, et al. Biochim Biophys Acta, 1987 Jan 30. PMID 3542048
    5. Primary structures of and genes for new ribosomal proteins A and B in Escherichia coli. Wada A, et al. J Biochem, 1987 Mar. PMID 3298224

    See all (23) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. N-terminus verified by Edman degradation on complete protein
      Title: A method for the chemical generation of N-terminal peptide sequence tags for rapid protein identification.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables rRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in cytoplasmic translation NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in translation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		  
    part_of cytosolic large ribosomal subunit IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    part_of cytosolic large ribosomal subunit IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    50S ribosomal subunit protein L36

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3442618..3442734 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417758.1 50S ribosomal subunit protein L36 [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417758.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P0A7Q6
      Conserved Domains (1) summary
      pfam00444
      Location:1 → 38
      Ribosomal_L36; Ribosomal protein L36
    Nucleotide Protein
    Heading Accession and Version

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