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    bcsZ endo-1,4-D-glucanase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948046, updated on 17-Dec-2024

    Summary

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    Official Symbol
    bcsZ
    Official Full Name
    endo-1,4-D-glucanase
    Primary source
    ECOCYC:EG12258
    Locus tag
    b3531
    See related
    ASAP:ABE-0011541
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    bcsC; ECK3516; yhjM
    Summary
    First 21 aa are predicted to be a type I signal peptide. [More information is available at EcoGene: EG12258]. The bcsZ gene encodes an endo-1,4-D-glucanase which belongs to glycosyl hydrolase family 8 . [More information is available at EcoCyc: EG12258].
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    Genomic context

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    Sequence:
    NC_000913.3 (3689155..3690261, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene C4 dicarboxylate/orotate:H(+) symporter Neighboring gene c-di-GMP phosphodiesterase PdeK Neighboring gene cellulose synthase outer membrane channel Neighboring gene cellulose synthase periplasmic subunit Neighboring gene cellulose synthase catalytic subunit Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning of the Escherichia coli endo-1,4-D-glucanase gene and identification of its product. Park YW, et al. Mol Gen Genet, 1999 Mar. PMID 10102357
    2. Tight modulation of Escherichia coli bacterial biofilm formation through controlled expression of adhesion factors. Da Re S, et al. Appl Environ Microbiol, 2007 May. PMID 17384304, Free PMC Article
    3. Global gene expression profiling in Escherichia coli K12. The effects of oxygen availability and FNR. Salmon K, et al. J Biol Chem, 2003 Aug 8. PMID 12754220
    4. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
    5. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables cellulase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables cellulase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity, acting on glycosyl bonds IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in cellulose catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in extracellular region IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    endo-1,4-D-glucanase
    NP_417988.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3689155..3690261 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417988.1 endo-1,4-D-glucanase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417988.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376M0V4, C4PG04
      Conserved Domains (1) summary
      PRK11097
      Location:1 → 368
      PRK11097; cellulase
    Nucleotide Protein
    Heading Accession and Version

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