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    yhjV putative transporter YhjV [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948057, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yhjV
    Official Full Name
    putative transporter YhjV
    Primary source
    ECOCYC:EG12266
    Locus tag
    b3539
    See related
    ASAP:ABE-0011562
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3526
    Summary
    HAAAP family. [More information is available at EcoGene: EG12266]. The YhjV protein is an uncharacterised member of the STP family of transporters. [More information is available at EcoCyc: EG12266].
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    Genomic context

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    Sequence:
    NC_000913.3 (3700563..3701834)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene small toxic polypeptide LdrD Neighboring gene ncRNA Neighboring gene dipeptide ABC transporter ATP binding subunit DppF Neighboring gene dipeptide ABC transporter ATP binding subunit DppD Neighboring gene dipeptide ABC transporter membrane subunit DppC

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Screen for genes involved in radiation survival of Escherichia coli and construction of a reference database. Sargentini NJ, et al. Mutat Res, 2016 Nov-Dec. PMID 27718375
    2. Analysis of the Escherichia coli genome. V. DNA sequence of the region from 76.0 to 81.5 minutes. Sofia HJ, et al. Nucleic Acids Res, 1994 Jul 11. PMID 8041620, Free PMC Article
    3. Experimentally based topology models for E. coli inner membrane proteins. Rapp M, et al. Protein Sci, 2004 Apr. PMID 15044727, Free PMC Article
    4. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
    5. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables transmembrane transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Process Evidence Code Pubs
    involved_in amino acid transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in amino acid transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    acts_upstream_of_or_within response to radiation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative transporter YhjV

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3700563..3701834
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417996.1 putative transporter YhjV [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417996.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376M0U3
      Conserved Domains (1) summary
      COG0814
      Location:11 → 411
      SdaC; Amino acid permease [Amino acid transport and metabolism]
    Nucleotide Protein
    Heading Accession and Version

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