U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    yidQ DUF1375 domain-containing putative lipoprotein YidQ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948199, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    yidQ
    Official Full Name
    DUF1375 domain-containing putative lipoprotein YidQ
    Primary source
    ECOCYC:EG11712
    Locus tag
    b3688
    See related
    ASAP:ABE-0012063
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ecfI; ECK3680
    Summary
    yceK and yidQ are paralogs. [More information is available at EcoGene: EG11712]. YidQ is a protein with a possible extracytoplasmic function . [More information is available at EcoCyc: EG11712].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (3867728..3868060)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene small heat shock protein IbpB Neighboring gene small heat shock protein IbpA Neighboring gene DUF3748 domain-containing galacturonate catabolism protein YidR Neighboring gene colicin M resistance protein Neighboring gene D-galactonate:H(+) symporter

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Systematic Localization of Escherichia coli Membrane Proteins. Sueki A, et al. mSystems, 2020 Mar 3. PMID 32127419, Free PMC Article
    2. Characterization of the Escherichia coli sigma E regulon. Dartigalongue C, et al. J Biol Chem, 2001 Jun 15. PMID 11274153
    3. DNA sequence and analysis of 136 kilobases of the Escherichia coli genome: organizational symmetry around the origin of replication. Burland V, et al. Genomics, 1993 Jun. PMID 7686882
    4. Over 1000 genes are involved in the DNA damage response of Escherichia coli. Khil PP, et al. Mol Microbiol, 2002 Apr. PMID 11967071
    5. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Process Evidence Code Pubs
    acts_upstream_of_or_within DNA damage response IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell outer membrane HDA PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    DUF1375 domain-containing putative lipoprotein YidQ

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3867728..3868060
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418143.2 DUF1375 domain-containing putative lipoprotein YidQ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418143.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8T5YE99
      Conserved Domains (1) summary
      PRK11616
      Location:2 → 110
      PRK11616; hypothetical protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.