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    frvR putative DNA-binding transcriptional regulator FrvR [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948389, updated on 3-Dec-2024

    Summary

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    Official Symbol
    frvR
    Official Full Name
    putative DNA-binding transcriptional regulator FrvR
    Primary source
    ECOCYC:EG11861
    Locus tag
    b3897
    See related
    ASAP:ABE-0012720
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3890; yiiH
    Summary
    FrvR is predicted to be a negative DNA-binding transcriptional regulator of the sugar phosphotransferase system. [More information is available at EcoCyc: EG11861].
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    Genomic context

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    Sequence:
    NC_000913.3 (4088107..4089855, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene sulfurtransferase for molybdenum cofactor sulfuration Neighboring gene DUF3829 domain-containing lipoprotein YiiG Neighboring gene peptidase M42 family protein FrvX Neighboring gene putative PTS enzyme IIBC component FrvB Neighboring gene putative PTS enzyme IIA component FrvA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Novel phosphotransferase system genes revealed by bacterial genome analysis: unique, putative fructose- and glucoside-specific systems. Reizer J, et al. Protein Sci, 1994 Mar. PMID 8019415, Free PMC Article
    2. Phenotypic screening of Escherichia coli K-12 Tn5 insertion libraries, using whole-genome oligonucleotide microarrays. Winterberg KM, et al. Appl Environ Microbiol, 2005 Jan. PMID 15640221, Free PMC Article
    3. Analysis of the Escherichia coli genome. III. DNA sequence of the region from 87.2 to 89.2 minutes. Plunkett G 3rd, et al. Nucleic Acids Res, 1993 Jul 25. PMID 8346018, Free PMC Article
    4. The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12. Pérez-Rueda E, et al. Nucleic Acids Res, 2000 Apr 15. PMID 10734204, Free PMC Article
    5. Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea. Pérez-Rueda E, et al. Comput Biol Chem, 2004 Dec. PMID 15556475

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative DNA-binding transcriptional regulator FrvR

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4088107..4089855 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418333.1 putative DNA-binding transcriptional regulator FrvR [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418333.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A775TKB1
      Conserved Domains (1) summary
      PRK09863
      Location:1 → 580
      PRK09863; putative frv operon regulatory protein; Provisional
    Nucleotide Protein
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