U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    yiiS DUF406 domain-containing protein YiiS [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948416, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    yiiS
    Official Full Name
    DUF406 domain-containing protein YiiS
    Primary source
    ECOCYC:EG11876
    Locus tag
    b3922
    See related
    ASAP:ABE-0012813
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3914
    Summary
    EvgAS regulon. [More information is available at EcoGene: EG11876]. Regulation has been described . [More information is available at EcoCyc: EG11876].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (4112967..4113266)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF1454 domain-containing protein YiiQ Neighboring gene DUF805 domain-containing protein YiiR Neighboring gene universal stress protein D Neighboring gene flavodoxin/ferredoxin-NADP(+) reductase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. In vitro identification of Rns-regulated genes. Munson GP, et al. J Bacteriol, 2002 Feb. PMID 11807082, Free PMC Article
    2. New members of the Escherichia coli sigmaE regulon identified by a two-plasmid system. Rezuchova B, et al. FEMS Microbiol Lett, 2003 Aug 8. PMID 12900013
    3. Solution NMR structures of proteins VPA0419 from Vibrio parahaemolyticus and yiiS from Shigella flexneri provide structural coverage for protein domain family PFAM 04175. Singarapu KK, et al. Proteins, 2010 Feb 15. PMID 19927321, Free PMC Article
    4. Escherichia coli gene expression responsive to levels of the response regulator EvgA. Masuda N, et al. J Bacteriol, 2002 Nov. PMID 12399493, Free PMC Article
    5. Analysis of the Escherichia coli genome. III. DNA sequence of the region from 87.2 to 89.2 minutes. Plunkett G 3rd, et al. Nucleic Acids Res, 1993 Jul 25. PMID 8346018, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    is_active_in cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    DUF406 domain-containing protein YiiS

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4112967..4113266
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418357.1 DUF406 domain-containing protein YiiS [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418357.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      W1WDM9
      Conserved Domains (1) summary
      PRK09981
      Location:1 → 99
      PRK09981; DUF406 domain-containing protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.