U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    yjjQ DNA-binding transcriptional repressor YjjQ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948896, updated on 17-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    yjjQ
    Official Full Name
    DNA-binding transcriptional repressor YjjQ
    Primary source
    ECOCYC:G7947
    Locus tag
    b4365
    See related
    ASAP:ABE-0014322
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4355
    Summary
    YjjQ may play a role in detoxification of methylglyoxal (MG) and dihydroxyacetone (DHA) . [More information is available at EcoCyc: G7947].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (4603477..4604202)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene primosomal protein DnaT Neighboring gene putative succinate exporter YjjB Neighboring gene putative succinate exporter YjjP Neighboring gene DNA-binding transcriptional regulator BglJ Neighboring gene ferric-siderophore reductase FhuF Neighboring gene DUF1435 domain-containing protein YjjZ

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. LuxR family transcriptional repressor YjjQ modulates the biofilm formation and motility of avian pathogenic Escherichia coli. Fu D, et al. Res Vet Sci, 2022 Dec 20. PMID 35901637
    2. YjjQ Represses Transcription of flhDC and Additional Loci in Escherichia coli. Wiebe H, et al. J Bacteriol, 2015 Aug. PMID 26078445, Free PMC Article
    3. Characterization of a yjjQ mutant of avian pathogenic Escherichia coli (APEC). Li G, et al. Microbiology (Reading), 2008 Apr. PMID 18375801
    4. Genome-wide screen for Salmonella genes required for long-term systemic infection of the mouse. Lawley TD, et al. PLoS Pathog, 2006 Feb. PMID 16518469, Free PMC Article
    5. Identification of genes required for avian Escherichia coli septicemia by signature-tagged mutagenesis. Li G, et al. Infect Immun, 2005 May. PMID 15845486, Free PMC Article

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. LuxR family transcriptional repressor YjjQ modulates the biofilm formation and motility of avian pathogenic Escherichia coli.
      Title: LuxR family transcriptional repressor YjjQ modulates the biofilm formation and motility of avian pathogenic Escherichia coli.
    2. We characterize YjjQ as transcriptional repressor of flagellar motility and of additional loci related to pathogenicity.
      Title: YjjQ Represses Transcription of flhDC and Additional Loci in Escherichia coli.
    Submit: New GeneRIF Correction

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within response to methylglyoxal IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    DNA-binding transcriptional repressor YjjQ

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4603477..4604202
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418785.1 DNA-binding transcriptional repressor YjjQ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418785.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B9AQ71
      Conserved Domains (1) summary
      COG2197
      Location:10 → 203
      CitB; DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains [Signal transduction mechanisms, Transcription]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.