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    ymfD putative SAM-dependent methyltransferase YmfD [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945329, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ymfD
    Official Full Name
    putative SAM-dependent methyltransferase YmfD
    Primary source
    ECOCYC:G6582
    Locus tag
    b1137
    See related
    ASAP:ABE-0003825
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1123
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    Genomic context

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    Sequence:
    NC_000913.3 (1196867..1197532, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene isocitrate dehydrogenase Neighboring gene ncRNA Neighboring gene uncharacterized protein YmfE Neighboring gene cell death peptidase Lit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of the lambdoid prophage element e14 in the E. coli K-12 genome. Mehta P, et al. BMC Microbiol, 2004 Jan 20. PMID 14733619, Free PMC Article
    2. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    putative SAM-dependent methyltransferase YmfD

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1196867..1197532 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415655.1 putative SAM-dependent methyltransferase YmfD [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415655.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P75967
      Conserved Domains (1) summary
      pfam08242
      Location:44 → 145
      Methyltransf_12; Methyltransferase domain
    Nucleotide Protein
    Heading Accession and Version

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