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    ydfX protein YdfX [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946112, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ydfX
    Official Full Name
    protein YdfX
    Primary source
    ECOCYC:G6835
    Locus tag
    b1568
    See related
    ASAP:ABE-0005239
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1562
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    Genomic context

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    Sequence:
    NC_000913.3 (1647346..1647636, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene PF14282 family protein FlxA Neighboring gene protein YdfW Neighboring gene putative DNA-binding transcriptional regulator DicC Neighboring gene DNA-binding transcriptional dual regulator DicA Neighboring gene DUF1391 domain-containing protein YdfA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A systematic investigation identifies a significant number of probable pseudogenes in the Escherichia coli genome. Homma K, et al. Gene, 2002 Jul 10. PMID 12234664
    2. Prophages and bacterial genomics: what have we learned so far? Casjens S. Mol Microbiol, 2003 Jul. PMID 12886937
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    protein YdfX

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1647346..1647636 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009518793.1 protein YdfX [Escherichia coli str. K-12 substr. MG1655]

      Status: PROVISIONAL

      Conserved Domains (1) summary
      pfam06254
      Location:59 → 93
      YdaT_toxin; Putative bacterial toxin ydaT
    Nucleotide Protein
    Heading Accession and Version

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