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    ybaN DUF454 domain-containing inner membrane protein YbaN [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945558, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ybaN
    Official Full Name
    DUF454 domain-containing inner membrane protein YbaN
    Primary source
    ECOCYC:EG12843
    Locus tag
    b0468
    See related
    ASAP:ABE-0001625
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0462
    Summary
    YbaN is an inner membrane protein with four predicted transmembrane domains. [More information is available at EcoCyc: EG12843].
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    Genomic context

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    Sequence:
    NC_000913.3 (490882..491259)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF2496 domain-containing protein YbaM Neighboring gene primosomal replication protein N'' Neighboring gene adenine phosphoribosyltransferase Neighboring gene DNA polymerase III subunit gamma;DNA polymerase III subunit tau

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The priB and priC replication proteins of Escherichia coli. Genes, DNA sequence, overexpression, and purification. Zavitz KH, et al. J Biol Chem, 1991 Jul 25. PMID 1856227
    2. Detection of new genes in a bacterial genome using Markov models for three gene classes. Borodovsky M, et al. Nucleic Acids Res, 1995 Sep 11. PMID 7567469, Free PMC Article
    3. Cell-free complements in vivo expression of the E. coli membrane proteome. Savage DF, et al. Protein Sci, 2007 May. PMID 17456747, Free PMC Article
    4. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447
    5. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    DUF454 domain-containing inner membrane protein YbaN

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      490882..491259
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415001.1 DUF454 domain-containing inner membrane protein YbaN [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415001.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A377DW17
      Conserved Domains (1) summary
      PRK10527
      Location:1 → 125
      PRK10527; DUF454 family protein
    Nucleotide Protein
    Heading Accession and Version

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