U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    araG arabinose ABC transporter ATP binding subunit [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946408, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    araG
    Official Full Name
    arabinose ABC transporter ATP binding subunit
    Primary source
    ECOCYC:EG10058
    Locus tag
    b1900
    See related
    ASAP:ABE-0006328
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1898
    Summary
    The AraFGH arabinose transporter is a member of the ATP Binding Cassette (ABC) transporter superfamily. [More information is available at EcoCyc: EG10058].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (1983555..1985069, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene trehalose-6-phosphate synthase Neighboring gene trehalose-6-phosphate phosphatase Neighboring gene arabinose ABC transporter membrane subunit Neighboring gene arabinose ABC transporter periplasmic binding protein Neighboring gene putative ferritin-like protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Biochemical and physiological properties of the DNA binding domain of AraC protein. Timmes A, et al. J Mol Biol, 2004 Jul 16. PMID 15223316
    2. Escherichia coli K12 arabinose-binding protein mutants with altered transport properties. Kehres DG, et al. Protein Sci, 1992 Dec. PMID 1304895, Free PMC Article
    3. High-affinity L-arabinose transport operon. Gene product expression and mRNAs. Horazdovsky BF, et al. J Mol Biol, 1987 Sep 5. PMID 2445995
    4. Regulatable arabinose-inducible gene expression system with consistent control in all cells of a culture. Khlebnikov A, et al. J Bacteriol, 2000 Dec. PMID 11092865, Free PMC Article
    5. Regulation of the L-arabinose transport operons in Escherichia coli. Kolodrubetz D, et al. J Mol Biol, 1981 Sep 15. PMID 6461771

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables ABC-type L-arabinose transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP hydrolysis activity ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    enables L-arabinose transmembrane transporter activity EXP
    Inferred from Experiment
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-arabinose transmembrane transport NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in membrane NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    arabinose ABC transporter ATP binding subunit
    NP_416413.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1983555..1985069 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416413.1 arabinose ABC transporter ATP binding subunit [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416413.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B9ALN7
      Conserved Domains (1) summary
      PRK11288
      Location:4 → 504
      araG; L-arabinose ABC transporter ATP-binding protein AraG
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.