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    chiQ lipoprotein ChiQ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945713, updated on 3-Dec-2024

    Summary

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    Official Symbol
    chiQ
    Official Full Name
    lipoprotein ChiQ
    Primary source
    ECOCYC:G6371
    Locus tag
    b0682
    See related
    ASAP:ABE-0002325
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0670; ybfN
    Summary
    First 16 aa are a type II signal peptide. [More information is available at EcoGene: EG13660].
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    Genomic context

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    Sequence:
    NC_000913.3 (709790..710116)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene chitooligosaccharide outer membrane channel Neighboring gene DNA-binding transcriptional dual regulator Fur Neighboring gene RyhB-regulated fur leader peptide Neighboring gene flavodoxin 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A conserved small RNA promotes silencing of the outer membrane protein YbfM. Rasmussen AA, et al. Mol Microbiol, 2009 May. PMID 19400782
    2. An RNA trap helps bacteria get the most out of chitosugars. Vogel J. Mol Microbiol, 2009 Sep. PMID 19659640
    3. Toxins Hha and CspD and small RNA regulator Hfq are involved in persister cell formation through MqsR in Escherichia coli. Kim Y, et al. Biochem Biophys Res Commun, 2010 Jan 1. PMID 19909729, Free PMC Article
    4. Switching off small RNA regulation with trap-mRNA. Overgaard M, et al. Mol Microbiol, 2009 Sep. PMID 19682266
    5. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    lipoprotein ChiQ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      709790..710116
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415208.1 lipoprotein ChiQ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415208.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7EG96
      Conserved Domains (1) summary
      pfam13982
      Location:20 → 107
      YbfN; YbfN-like lipoprotein
    Nucleotide Protein
    Heading Accession and Version

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