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    ybgC esterase/thioesterase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948907, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ybgC
    Official Full Name
    esterase/thioesterase
    Primary source
    ECOCYC:EG11110
    Locus tag
    b0736
    See related
    ASAP:ABE-0002508
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0725
    Summary
    YbgC-ACP interacts with PssA and PlsB. ybgC is the first gene in tolQRA operon. [More information is available at EcoGene: EG11110]. Esterase/thioesterase activity of YbgC was discovered in a high-throughput screen of purified proteins . [More information is available at EcoCyc: EG11110].
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    Genomic context

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    Sequence:
    NC_000913.3 (774752..775156)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene cytochrome bd-I accessory subunit CydX Neighboring gene PF09600 family protein YbgE Neighboring gene Tol-Pal system protein TolQ Neighboring gene Tol-Pal system protein TolR Neighboring gene Tol-Pal system protein TolA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of proteins with the 'hot dog' fold: prediction of function and identification of catalytic residues of hypothetical proteins. Pidugu LS, et al. BMC Struct Biol, 2009 May 28. PMID 19473548, Free PMC Article
    2. Characterization of the tol-pal region of Escherichia coli K-12: translational control of tolR expression by TolQ and identification of a new open reading frame downstream of pal encoding a periplasmic protein. Vianney A, et al. J Bacteriol, 1996 Jul. PMID 8763928, Free PMC Article
    3. Organisation and evolution of the tol-pal gene cluster. Sturgis JN. J Mol Microbiol Biotechnol, 2001 Jan. PMID 11200223
    4. Enrichment of low abundance proteins of Escherichia coli by hydroxyapatite chromatography. Fountoulakis M, et al. Electrophoresis, 1999 Aug. PMID 10493123
    5. A protein network for phospholipid synthesis uncovered by a variant of the tandem affinity purification method in Escherichia coli. Gully D, et al. Proteomics, 2006 Jan. PMID 16294310

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables fatty acyl-CoA hydrolase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    enables thiolester hydrolase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables thiolester hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    esterase/thioesterase

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      774752..775156
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415264.1 esterase/thioesterase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415264.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376MAY1
      Conserved Domains (1) summary
      PRK10800
      Location:4 → 133
      PRK10800; acyl-CoA thioesterase YbgC; Provisional
    Nucleotide Protein
    Heading Accession and Version

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