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    yccF PF03733 family inner membrane protein YccF [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945594, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yccF
    Official Full Name
    PF03733 family inner membrane protein YccF
    Primary source
    ECOCYC:G6496
    Locus tag
    b0961
    See related
    ASAP:ABE-0003253
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0952
    Summary
    YccF is an inner membrane protein with three predicted transmembrane domains. [More information is available at EcoCyc: G6496].
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    Genomic context

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    Sequence:
    NC_000913.3 (1023902..1024348, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene cell division inhibitor SulA Neighboring gene transcriptional coactivator for CRP Neighboring gene putative transporter YccS Neighboring gene DNA helicase IV Neighboring gene methylglyoxal synthase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The molecular cloning of the gene encoding the Escherichia coli 75-kDa helicase and the determination of its nucleotide sequence and gentic map position. Wood ER, et al. J Biol Chem, 1989 May 15. PMID 2542273
    2. Intrinsic and extrinsic approaches for detecting genes in a bacterial genome. Borodovsky M, et al. Nucleic Acids Res, 1994 Nov 11. PMID 7984428, Free PMC Article
    3. Cell-free complements in vivo expression of the E. coli membrane proteome. Savage DF, et al. Protein Sci, 2007 May. PMID 17456747, Free PMC Article
    4. Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS. Zhang N, et al. Proteomics, 2007 Feb. PMID 17309111
    5. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    PF03733 family inner membrane protein YccF

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1023902..1024348 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415481.1 PF03733 family inner membrane protein YccF [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415481.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7JJL5, A0A8T5YCQ8
      Conserved Domains (1) summary
      COG3304
      Location:1 → 134
      YccF; Uncharacterized membrane protein YccF, DUF307 family [Function unknown]
    Nucleotide Protein
    Heading Accession and Version

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