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    yedE putative selenium transporter YedE [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945192, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yedE
    Official Full Name
    putative selenium transporter YedE
    Primary source
    ECOCYC:EG11660
    Locus tag
    b1929
    See related
    ASAP:ABE-0006422
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1928
    Summary
    YedE is an inner membrane protein with ten predicted transmembrane domains. [More information is available at EcoCyc: EG11660].
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    Genomic context

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    Sequence:
    NC_000913.3 (2008277..2009482)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene alpha-amylase Neighboring gene lipoprotein YedD Neighboring gene putative sulfurtransferase YedF Neighboring gene genome maintenance protein Neighboring gene putative acetyltransferase YedL

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Organization of the Escherichia coli and Salmonella typhimurium chromosomes between flagellar regions IIIa and IIIb, including a large non-coding region. Raha M, et al. J Gen Microbiol, 1993 Jul. PMID 8371104
    2. Comparison of SDS- and methanol-assisted protein solubilization and digestion methods for Escherichia coli membrane proteome analysis by 2-D LC-MS/MS. Zhang N, et al. Proteomics, 2007 Feb. PMID 17309111
    3. A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map. Itoh T, et al. DNA Res, 1996 Dec 31. PMID 9097040
    4. Interaction network containing conserved and essential protein complexes in Escherichia coli. Butland G, et al. Nature, 2005 Feb 3. PMID 15690043
    5. Experimentally constrained topology models for 51,208 bacterial inner membrane proteins. Granseth E, et al. J Mol Biol, 2005 Sep 23. PMID 16120447

    See all (9) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in plasma membrane ISM
    Inferred from Sequence Model
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative selenium transporter YedE

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2008277..2009482
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416439.1 putative selenium transporter YedE [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416439.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B9AHT8
      Conserved Domains (1) summary
      PRK11099
      Location:5 → 398
      PRK11099; putative inner membrane protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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