U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    tmaR PTS system regulator TmaR [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946541, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    tmaR
    Official Full Name
    PTS system regulator TmaR
    Primary source
    ECOCYC:G7087
    Locus tag
    b2007
    See related
    ASAP:ABE-0006663
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2001; yeeX
    Summary
    The protein has been detected . [More information is available at EcoCyc: G7087].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (2079032..2079361, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene cytoskeleton-binding toxin CbtA Neighboring gene putative uncharacterized protein YeeW Neighboring gene pseudo Neighboring gene putative uncharacterized protein YoeF Neighboring gene protein YoeJ Neighboring gene putative transporter YeeA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Identification and functional analysis of 'hypothetical' genes expressed in Haemophilus influenzae. Kolker E, et al. Nucleic Acids Res, 2004. PMID 15121896, Free PMC Article
    2. Small genes/gene-products in Escherichia coli K-12. Wasinger VC, et al. FEMS Microbiol Lett, 1998 Dec 15. PMID 9868784
    3. A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map. Itoh T, et al. DNA Res, 1996 Dec 31. PMID 9097040
    4. Optimized fragmentation schemes and data analysis strategies for proteome-wide cross-link identification. Liu F, et al. Nat Commun, 2017 May 19. PMID 28524877, Free PMC Article
    5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. N-terminus verified by Edman degradation on complete protein
      Title: Small genes/gene-products in Escherichia coli K-12.
    Submit: New GeneRIF Correction

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    General protein information

    Go to the top of the page Help
    Preferred Names
    PTS system regulator TmaR

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2079032..2079361 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416511.4 PTS system regulator TmaR [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416511.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B9AI54, A0A6N8R0V1
      Conserved Domains (1) summary
      PRK05423
      Location:1 → 104
      PRK05423; DUF496 family protein
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.