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    yfhH putative DNA-binding transcriptional regulator YfhH [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 947030, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yfhH
    Official Full Name
    putative DNA-binding transcriptional regulator YfhH
    Primary source
    ECOCYC:EG12308
    Locus tag
    b2561
    See related
    ASAP:ABE-0008428
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2559
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    Genomic context

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    Sequence:
    NC_000913.3 (2698759..2699607)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene membrane-bound lytic murein transglycosylase F Neighboring gene tRNA adenosine(34) deaminase Neighboring gene phosphatidylglycerophosphatase C Neighboring gene putative 4Fe-4S cluster-containing protein YfhL Neighboring gene toxic peptide ShoB

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Analysis of an Escherichia coli mutant strain resistant to the cell-killing function encoded by the gef gene family. Poulsen LK, et al. Mol Microbiol, 1992 Apr. PMID 1602968
    2. Intrinsic and extrinsic approaches for detecting genes in a bacterial genome. Borodovsky M, et al. Nucleic Acids Res, 1994 Nov 11. PMID 7984428, Free PMC Article
    3. The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12. Pérez-Rueda E, et al. Nucleic Acids Res, 2000 Apr 15. PMID 10734204, Free PMC Article
    4. Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea. Pérez-Rueda E, et al. Comput Biol Chem, 2004 Dec. PMID 15556475
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables carbohydrate derivative binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carbohydrate derivative metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in regulation of DNA-templated transcription IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative DNA-binding transcriptional regulator YfhH

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2698759..2699607
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417056.2 putative DNA-binding transcriptional regulator YfhH [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417056.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376FYA4, A0A895NKY4, A0A8H9VX67
      Conserved Domains (1) summary
      PRK11557
      Location:5 → 282
      PRK11557; MurR/RpiR family transcriptional regulator
    Nucleotide Protein
    Heading Accession and Version

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