U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    yjhQ putative acetyltransferase TopAI antitoxin YjhQ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 949059, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    yjhQ
    Official Full Name
    putative acetyltransferase TopAI antitoxin YjhQ
    Primary source
    ECOCYC:G7917
    Locus tag
    b4307
    See related
    ASAP:ABE-0014119
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK4297
    Summary
    Expression of yjhQ is induced more than 11-fold in biofilms of a tqsA mutant strain . [More information is available at EcoCyc: G7917].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (4533239..4533784, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene putative methyltransferase YjhP Neighboring gene toxin of the TopAI-YjhQ toxin-antitoxin system, TopA inhibitor Neighboring gene pseudo

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. An endogenous protein inhibitor, YjhX (TopAI), for topoisomerase I from Escherichia coli. Yamaguchi Y, et al. Nucleic Acids Res, 2015 Dec 2. PMID 26553797, Free PMC Article
    2. Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Burland V, et al. Nucleic Acids Res, 1995 Jun 25. PMID 7610040, Free PMC Article
    3. YdgG (TqsA) controls biofilm formation in Escherichia coli K-12 through autoinducer 2 transport. Herzberg M, et al. J Bacteriol, 2006 Jan. PMID 16385049, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables acyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables acyltransferase activity, transferring groups other than amino-acyl groups IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    putative acetyltransferase TopAI antitoxin YjhQ

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      4533239..4533784 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418727.1 putative acetyltransferase TopAI antitoxin YjhQ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418727.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376YED2
      Conserved Domains (1) summary
      COG3153
      Location:3 → 176
      yhbS; Predicted N-acetyltransferase YhbS [General function prediction only]
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.