U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    matA DNA-binding transcriptional dual regulator MatA [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 944966, updated on 3-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    matA
    Official Full Name
    DNA-binding transcriptional dual regulator MatA
    Primary source
    ECOCYC:G6165
    Locus tag
    b0294
    See related
    ASAP:ABE-0001011
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK0293; ecpR; ykgK
    Summary
    LuxR family. [More information is available at EcoGene: EG14324].
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Sequence:
    NC_000913.3 (310746..311336, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative fimbrial chaperone EcpB Neighboring gene common pilus major subunit Neighboring gene uncharacterized protein YkgL Neighboring gene 50S ribosomal subunit protein L36B Neighboring gene 50S ribosomal subunit protein L31B

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Interaction of the RcsB Response Regulator with Auxiliary Transcription Regulators in Escherichia coli. Pannen D, et al. J Biol Chem, 2016 Jan 29. PMID 26635367, Free PMC Article
    2. matB, a common fimbrillin gene of Escherichia coli, expressed in a genetically conserved, virulent clonal group. Pouttu R, et al. J Bacteriol, 2001 Aug. PMID 11466275, Free PMC Article
    3. Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea. Pérez-Rueda E, et al. Comput Biol Chem, 2004 Dec. PMID 15556475
    4. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. RcsB forms heterodimers with MatA (also known as EcpR) and with DctR
      Title: Interaction of the RcsB Response Regulator with Auxiliary Transcription Regulators in Escherichia coli.
    Submit: New GeneRIF Correction

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Go to the top of the page Help
    Preferred Names
    DNA-binding transcriptional dual regulator MatA

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      310746..311336 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_414828.1 DNA-binding transcriptional dual regulator MatA [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_414828.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      A7ZI28, B1J0X8
      UniProtKB/TrEMBL
      A0A1X3JL34, A0A1Y2ZR94, A0A2A2XL11, A0A369FS70
      Conserved Domains (2) summary
      PRK10360
      Location:86 → 187
      PRK10360; transcriptional regulator UhpA
      smart00421
      Location:146 → 187
      HTH_LUXR; helix_turn_helix, Lux Regulon
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.