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    nudJ phosphatase NudJ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945689, updated on 3-Dec-2024

    Summary

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    Official Symbol
    nudJ
    Official Full Name
    phosphatase NudJ
    Primary source
    ECOCYC:G6580
    Locus tag
    b1134
    See related
    ASAP:ABE-0003818
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1120; ymfB
    Summary
    Nudix hydrolase. [More information is available at EcoGene: EG13446]. The nudJ gene product is a member of the Nudix hydrolase superfamily. [More information is available at EcoCyc: G6580].
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    Genomic context

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    Sequence:
    NC_000913.3 (1193827..1194288, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene lysogenization regulator Neighboring gene tRNA-specific 2-thiouridylase Neighboring gene 23S rRNA pseudouridine(2457) synthase Neighboring gene isocitrate dehydrogenase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Crystallization and preliminary diffraction studies of Nudix hydrolase YmfB from Escherichia coli K-1. Hong MK, et al. Protein Pept Lett, 2009. PMID 19149682
    2. Biosynthesis and Activity of Prenylated FMN Cofactors. Wang PH, et al. Cell Chem Biol, 2018 May 17. PMID 29551348
    3. Three new Nudix hydrolases from Escherichia coli. Xu W, et al. J Biol Chem, 2006 Aug 11. PMID 16766526
    4. A genetic screen for the identification of thiamin metabolic genes. Lawhorn BG, et al. J Biol Chem, 2004 Oct 15. PMID 15292217
    5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables 4-amino-5-hydroxymethyl-2-methylpyrimidine diphosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables nucleoside diphosphate phosphatase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables nucleoside diphosphate phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables pyrophosphatase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables ribonucleoside triphosphate phosphatase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables ribonucleoside triphosphate phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables thiamine diphosphate phosphatase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables thiamine diphosphate phosphatase activity IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    phosphatase NudJ
    NP_415652.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1193827..1194288 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415652.1 phosphatase NudJ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415652.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A418GAI7
      Conserved Domains (1) summary
      cd03675
      Location:6 → 137
      Nudix_Hydrolase_2; Contains a crystal structure of the Nudix hydrolase from Nitrosomonas europaea, which has an unknown function. In general, members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X. Enzymes ...
    Nucleotide Protein
    Heading Accession and Version

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