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    pdxI pyridoxal reductase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945980, updated on 17-Dec-2024

    Summary

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    Official Symbol
    pdxI
    Official Full Name
    pyridoxal reductase
    Primary source
    ECOCYC:EG11309
    Locus tag
    b1406
    See related
    ASAP:ABE-0004698
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1399; ydbC
    Summary
    ydbC belongs to the NsrR regulon . [More information is available at EcoCyc: EG11309].
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    Genomic context

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    Sequence:
    NC_000913.3 (1474221..1475081)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene IS2 insertion element protein InsB Neighboring gene IS2 insertion element repressor InsA Neighboring gene IS30 family transposase Neighboring gene DUF2773 domain-containing protein YdbD Neighboring gene CDP-alcohol phosphatidyltransferase domain-containing protein YnbA Neighboring gene putative CDP-diglyceride synthase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Pyridoxal Reductase, PdxI, Is Critical for Salvage of Pyridoxal in Escherichia coli. Ito T, et al. J Bacteriol, 2020 May 27. PMID 32253339, Free PMC Article
    2. Multiple IS insertion sequences near the replication terminus in Escherichia coli K-12. Moszer I, et al. Biochimie, 1991 Nov. PMID 1665988
    3. Molecular characterization of PadA, a phenylacetaldehyde dehydrogenase from Escherichia coli. Ferrandez A, et al. FEBS Lett, 1997 Apr 7. PMID 9109378
    4. The NsrR regulon of Escherichia coli K-12 includes genes encoding the hybrid cluster protein and the periplasmic, respiratory nitrite reductase. Filenko N, et al. J Bacteriol, 2007 Jun. PMID 17449618, Free PMC Article
    5. A 570-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 28.0-40.1 min region on the linkage map. Aiba H, et al. DNA Res, 1996 Dec 31. PMID 9097039

    See all (12) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Pyridoxal Reductase, PdxI, Is Critical for Salvage of Pyridoxal in Escherichia coli.
      Title: Pyridoxal Reductase, PdxI, Is Critical for Salvage of Pyridoxal in Escherichia coli.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables aldo-keto reductase (NADPH) activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables pyridoxine:NADP 4-dehydrogenase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables pyridoxine:NADP 4-dehydrogenase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in pyridoxal 5'-phosphate salvage IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pyridoxal reductase
    NP_415924.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1474221..1475081
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415924.1 pyridoxal reductase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415924.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A478L240
      Conserved Domains (1) summary
      PRK10376
      Location:1 → 286
      PRK10376; putative oxidoreductase; Provisional
    Nucleotide Protein
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