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    yfaY IPR008135 CinA family protein YfaY [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945478, updated on 3-Dec-2024

    Summary

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    Official Symbol
    yfaY
    Official Full Name
    IPR008135 CinA family protein YfaY
    Primary source
    ECOCYC:G7162
    Locus tag
    b2249
    See related
    ASAP:ABE-0007441
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2242
    Summary
    YfaY is in the gephyrin/MoeA superfamily. [More information is available at EcoGene: EG14087].
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    Genomic context

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    Sequence:
    NC_000913.3 (2362431..2363633, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene L-rhamnonate dehydratase Neighboring gene putative DNA-binding transcriptional regulator YfaX Neighboring gene putative porin YfaZ Neighboring gene pyrimidine deoxynucleotide diphosphatase NudI

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Large-scale identification of protein-protein interaction of Escherichia coli K-12. Arifuzzaman M, et al. Genome Res, 2006 May. PMID 16606699, Free PMC Article
    2. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    3. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
    4. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    5. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    IPR008135 CinA family protein YfaY

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2362431..2363633 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416752.1 IPR008135 CinA family protein YfaY [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416752.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7EAJ6, A0AAN3IGM6
      Conserved Domains (1) summary
      PRK03673
      Location:1 → 396
      PRK03673; nicotinamide mononucleotide deamidase-related protein YfaY
    Nucleotide Protein
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