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    yqeH putative LuxR family transcriptional regulator YqeH [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945263, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yqeH
    Official Full Name
    putative LuxR family transcriptional regulator YqeH
    Primary source
    ECOCYC:G7466
    Locus tag
    b2846
    See related
    ASAP:ABE-0009349
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2844
    Summary
    This gene is a remnant of the type three secretion system (T3SS) pathogenicity island ETT2. [More information is available at EcoGene: EG13099]. yqeH is located within a remnant of an ETT2 (type III secretion system) pathogenicity island that is fully present in pathogenic strains such as Escherichia coli O157:H7 and at least partially present in most sequenced Escherichia coli and Shigella strains . [More information is available at EcoCyc: G7466].
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    Genomic context

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    Sequence:
    NC_000913.3 (2987536..2988168)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative acyltransferase Neighboring gene putative transporter YqeG Neighboring gene putative transcriptional regulator YqeI Neighboring gene protein YqeJ Neighboring gene uncharacterized protein YqeL

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The ETT2 gene cluster, encoding a second type III secretion system from Escherichia coli, is present in the majority of strains but has undergone widespread mutational attrition. Ren CP, et al. J Bacteriol, 2004 Jun. PMID 15150243, Free PMC Article
    2. A degenerate type III secretion system from septicemic Escherichia coli contributes to pathogenesis. Ideses D, et al. J Bacteriol, 2005 Dec. PMID 16291689, Free PMC Article
    3. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    4. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article
    5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative LuxR family transcriptional regulator YqeH

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2987536..2988168
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_417323.2 putative LuxR family transcriptional regulator YqeH [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_417323.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8T5ZC46
      Conserved Domains (1) summary
      COG2771
      Location:152 → 204
      CsgD; DNA-binding transcriptional regulator, CsgD family [Transcription]
    Nucleotide Protein
    Heading Accession and Version

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