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    yidL putative DNA-binding transcriptional regulator YidL [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 948186, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yidL
    Official Full Name
    putative DNA-binding transcriptional regulator YidL
    Primary source
    ECOCYC:EG11707
    Locus tag
    b3680
    See related
    ASAP:ABE-0012034
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK3671
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    Genomic context

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    Sequence:
    NC_000913.3 (3860283..3861176)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative inner membrane protein YidI Neighboring gene putative sulfatase/phosphatase YidJ Neighboring gene putative transporter YidK Neighboring gene pseudo Neighboring gene putative PTS enzyme II component GlvB Neighboring gene putative PTS enzyme II component GlvC

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Generating tetracycline-inducible auxotrophy in Escherichia coli and Salmonella enterica serovar Typhimurium by using an insertion element and a hyperactive transposase. Köstner M, et al. Appl Environ Microbiol, 2006 Jul. PMID 16820464, Free PMC Article
    2. The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12. Pérez-Rueda E, et al. Nucleic Acids Res, 2000 Apr 15. PMID 10734204, Free PMC Article
    3. DNA sequence and analysis of 136 kilobases of the Escherichia coli genome: organizational symmetry around the origin of replication. Burland V, et al. Genomics, 1993 Jun. PMID 7686882
    4. Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea. Pérez-Rueda E, et al. Comput Biol Chem, 2004 Dec. PMID 15556475
    5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative DNA-binding transcriptional regulator YidL

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      3860283..3861176
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_418136.2 putative DNA-binding transcriptional regulator YidL [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_418136.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A6N3FAY7
      Conserved Domains (2) summary
      PRK13503
      Location:62 → 279
      PRK13503; HTH-type transcriptional activator RhaS
      smart00342
      Location:200 → 281
      HTH_ARAC; helix_turn_helix, arabinose operon control protein
    Nucleotide Protein
    Heading Accession and Version

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