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    oppD murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppD [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 945802, updated on 17-Dec-2024

    Summary

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    Official Symbol
    oppD
    Official Full Name
    murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppD
    Primary source
    ECOCYC:EG10677
    Locus tag
    b1246
    See related
    ASAP:ABE-0004178
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1240
    Summary
    OppD is an ATP-binding component of the oligopeptide ABC transporter and the murein tripeptide ABC transporter. [More information is available at EcoCyc: EG10677].
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    Genomic context

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    Sequence:
    NC_000913.3 (1304754..1305767)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppB Neighboring gene murein tripeptide ABC transporter/oligopeptide ABC transporter inner membrane subunit OppC Neighboring gene murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppF Neighboring gene DUF440 domain-containing protein YciU Neighboring gene cardiolipin synthase A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genetic organization of the oligopeptide permease (opp) locus of Salmonella typhimurium and Escherichia coli. Hogarth BG, et al. J Bacteriol, 1983 Mar. PMID 6338001, Free PMC Article
    2. The structural basis of sequence-independent peptide binding by OppA protein. Tame JR, et al. Science, 1994 Jun 10. PMID 8202710
    3. Genetic analysis of Escherichia coli oligopeptide transport mutants. Andrews JC, et al. J Bacteriol, 1985 Feb. PMID 2981814, Free PMC Article
    4. The periplasmic murein peptide-binding protein MppA is a negative regulator of multiple antibiotic resistance in Escherichia coli. Li H, et al. J Bacteriol, 1999 Aug. PMID 10438753, Free PMC Article
    5. Structure determination of OppA at 2.3 A resolution using multiple-wavelength anomalous dispersion methods. Glover ID, et al. Acta Crystallogr D Biol Crystallogr, 1995 Jan 1. PMID 15299334

    See all (29) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables ATP binding ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables peptidoglycan peptide transmembrane transporter activity EXP
    Inferred from Experiment
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in oligopeptide import across plasma membrane NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    involved_in peptide transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within peptidoglycan-associated peptide transport EXP
    Inferred from Experiment
    more info
    		 PubMed 
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in tripeptide import across plasma membrane NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    located_in membrane NAS
    Non-traceable Author Statement
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppD
    YP_025300.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1304754..1305767
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_025300.1 murein tripeptide ABC transporter/oligopeptide ABC transporter ATP binding subunit OppD [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for YP_025300.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8S7TMP3
      Conserved Domains (1) summary
      PRK09473
      Location:8 → 336
      oppD; oligopeptide transporter ATP-binding component; Provisional
    Nucleotide Protein
    Heading Accession and Version

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