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    ycjG L-Ala-D/L-Glu epimerase [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946013, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ycjG
    Official Full Name
    L-Ala-D/L-Glu epimerase
    Primary source
    ECOCYC:G6661
    Locus tag
    b1325
    See related
    ASAP:ABE-0004448
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1321; ycjH
    Summary
    YcjG is an L-Ala-D/L-Glu epimerase that may play a role in the metabolism of murein peptide. [More information is available at EcoCyc: G6661].
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    Genomic context

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    Sequence:
    NC_000913.3 (1388930..1389895)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DNA-binding transcriptional dual regulator TyrR Neighboring gene lipid hydroperoxide peroxidase Neighboring gene murein tripeptide amidase A Neighboring gene putative uncharacterized protein YmjC Neighboring gene uncharacterized protein YmjD Neighboring gene putative hydrolase YcjY

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolutionary potential of (beta/alpha)8-barrels: stepwise evolution of a "new" reaction in the enolase superfamily. Vick JE, et al. Biochemistry, 2007 Dec 18. PMID 18020459
    2. Evolutionary potential of (beta/alpha)8-barrels: in vitro enhancement of a "new" reaction in the enolase superfamily. Vick JE, et al. Biochemistry, 2005 Sep 6. PMID 16128573
    3. Chemical and enzymatic synthesis of fluorinated-dehydroalanine-containing peptides. Zhou H, et al. Chembiochem, 2003 Nov 7. PMID 14613113
    4. Evolutionary potential of (beta/alpha)8-barrels: functional promiscuity produced by single substitutions in the enolase superfamily. Schmidt DM, et al. Biochemistry, 2003 Jul 22. PMID 12859183
    5. Thioredoxin-linked "thiol peroxidase" from periplasmic space of Escherichia coli. Cha MK, et al. J Biol Chem, 1995 Dec 1. PMID 7499381

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables L-Ala-D/L-Glu epimerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables racemase and epimerase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables racemase and epimerase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables racemase and epimerase activity, acting on amino acids and derivatives IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables racemase and epimerase activity, acting on amino acids and derivatives IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in amino acid catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in cell wall organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in peptide metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    involved_in peptidoglycan turnover IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    L-Ala-D/L-Glu epimerase
    NP_415841.4

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1388930..1389895
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_415841.4 L-Ala-D/L-Glu epimerase [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_415841.4

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A8T5ZDX0
      Conserved Domains (1) summary
      PRK15129
      Location:1 → 321
      PRK15129; L-Ala-D/L-Glu epimerase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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