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    yedJ putative HD superfamily phosphohydrolase YedJ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946478, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yedJ
    Official Full Name
    putative HD superfamily phosphohydrolase YedJ
    Primary source
    ECOCYC:EG12710
    Locus tag
    b1962
    See related
    ASAP:ABE-0006512
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1960
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    Genomic context

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    Sequence:
    NC_000913.3 (2032384..2033079, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative transporter YedA Neighboring gene DNA mismatch endonuclease Vsr Neighboring gene DNA-cytosine methyltransferase Neighboring gene cell division protein DrpB Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Nucleotide sequence of the dcm locus of Escherichia coli K12. Hanck T, et al. Nucleic Acids Res, 1989 Jul 25. PMID 2527357, Free PMC Article
    2. Detection of new genes in a bacterial genome using Markov models for three gene classes. Borodovsky M, et al. Nucleic Acids Res, 1995 Sep 11. PMID 7567469, Free PMC Article
    3. A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map. Itoh T, et al. DNA Res, 1996 Dec 31. PMID 9097040
    4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    putative HD superfamily phosphohydrolase YedJ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2032384..2033079 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416471.1 putative HD superfamily phosphohydrolase YedJ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416471.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A5B9AI23, A0A8S7ENX2
      Conserved Domains (1) summary
      PRK10119
      Location:1 → 231
      PRK10119; putative hydrolase; Provisional
    Nucleotide Protein
    Heading Accession and Version

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