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    yeeZ putative epimerase YeeZ [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946538, updated on 17-Dec-2024

    Summary

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    Official Symbol
    yeeZ
    Official Full Name
    putative epimerase YeeZ
    Primary source
    ECOCYC:G7089
    Locus tag
    b2016
    See related
    ASAP:ABE-0006702
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK2010
    Summary
    The first 24 aa are predicted to be a type I signal peptide. [More information is available at EcoGene: EG13393]. In a study of the Escherichia coli complexome, YeeZ was found in a cytoplasmic complex together with YbbN and YeeN . [More information is available at EcoCyc: G7089].
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    Genomic context

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    Sequence:
    NC_000913.3 (2088304..2089128, complement)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene putrescine:H(+) symporter PlaP Neighboring gene uncharacterized protein YoeI Neighboring gene putative DNA-binding transcriptional regulator YeeY Neighboring gene ribosome-dependent mRNA interferase toxin YoeB Neighboring gene YefM antitoxin of the YoeB-YefM toxin-antitoxin pair and DNA binding transcriptional repressor Neighboring gene his operon leader peptide

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Role of the rapA gene in controlling antibiotic resistance of Escherichia coli biofilms. Lynch SV, et al. Antimicrob Agents Chemother, 2007 Oct. PMID 17664315, Free PMC Article
    2. Enrichment of low abundance proteins of Escherichia coli by hydroxyapatite chromatography. Fountoulakis M, et al. Electrophoresis, 1999 Aug. PMID 10493123
    3. A complexomic study of Escherichia coli using two-dimensional blue native/SDS polyacrylamide gel electrophoresis. Lasserre JP, et al. Electrophoresis, 2006 Aug. PMID 16858726
    4. Absolute protein expression profiling estimates the relative contributions of transcriptional and translational regulation. Lu P, et al. Nat Biotechnol, 2007 Jan. PMID 17187058
    5. Protein abundance profiling of the Escherichia coli cytosol. Ishihama Y, et al. BMC Genomics, 2008 Feb 27. PMID 18304323, Free PMC Article

    See all (8) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables aldehyde dehydrogenase (NAD+) activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    putative epimerase YeeZ

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      2088304..2089128 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416520.1 putative epimerase YeeZ [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416520.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376K4V7
      Conserved Domains (1) summary
      cd05266
      Location:4 → 259
      SDR_a4; atypical (a) SDRs, subgroup 4
    Nucleotide Protein
    Heading Accession and Version

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